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This project gathers the codes used in Gauzere et al. (2016) Partial genotyping at polymorphic markers can improve heritability estimates in sibling groups. This includes codes to simulate data sets and codes to analyse them with the animal model.
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Bayesian method to estimate individual female and male fecundities, based on genotypes and positions of established seedlings and of their candidate parent plants, and accounting for genotyping error.
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SMITID data visualisation using htmlwidget (with d3js) and Shiny compatible.
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A set of functions to work with functional data (column-list) in data frame.
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CI/CD pipeline for R Packages.
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CI/CD pipeline for R Shiny App.
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Permutations tests and performance inidicator for zero-inflated proportions response
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Codes and exe for the spatially explicit mating model used in Tonnabel et al. (2021) Sex-specific spatial variation in fitness in the highly dimorphic Leucadendron rubrum. MolEcol
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Virtual Machine (VirtualBox) under windows for GitLab runner CI/CD R environment
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