Commit 57d97601 authored by Jean-Francois Rey's avatar Jean-Francois Rey
Browse files

update vignette links

parent 98526e08
Pipeline #3909 passed with stages
in 86 minutes and 3 seconds
......@@ -114,7 +114,7 @@ length(landscape)
plot(landscape, main = "Landscape structure")
```
*See also tutorial on how to [parameterise landscape and dispersal](landscape_dispersal.html)
*See also tutorial on how to [parameterise landscape and dispersal](O3-landscape_dispersal.html)
to use your own landscape and compute your own dispersal matrices.*
Dispersal is given by a vectorised matrix giving the probability of dispersal from any field of the
......@@ -394,7 +394,7 @@ Then `simul_params` can be updated via `setOutputs()`:
simul_params <- setOutputs(simul_params, outputlist)
```
*See also tutorial on how to [run a numerical experimental design](run_exp_design.html)
*See also tutorial on how to [run a numerical experimental design](O2-run_exp_design.html)
to compute your own output variables and to run several simulations within an experimental design*
## Running the simulation
......
......@@ -62,7 +62,7 @@ simul_params <- createSimulParams(outputDir = getwd())
Then run the experimental design by updating target parameters with the values stored in `myDesign`.
Note that some parameters vary jointly (e.g. landscape and dispersal matrix).
*See tutorial on how to [run a simple simulation](run_simple_simul.html) for details on the different functions.*
*See tutorial on how to [run a simple simulation](O1-run_simple_simul.html) for details on the different functions.*
```{r, eval=FALSE}
for (i in 1:n){
print(paste("Running simulation", i, "/", n))
......
......@@ -41,7 +41,7 @@ simul_params@Landscape
Then you can simply call the method __allocateLandscapeCroptypes__ to allocate croptypes to the fields of
the landscape with controlled proportions and spatio-temporal aggregation (*see tutorial on how to [run a simple
simulation](run_simple_simul.html)*). Otherwise, you can use your own allocation (see below).
simulation](O1-run_simple_simul.html)*). Otherwise, you can use your own allocation (see below).
## Using your own croptype allocation
......
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